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  5. LOC_Os01g06070

LOC_Os01g06070


Description : expressed protein


Gene families : OG_42_0000230 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g06070
Cluster HCCA clusters: cluster_0139

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G085350.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G000610.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g06140 No alias expressed protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0007029 endoplasmic reticulum organization IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030686 90S preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR007750 DUF674 15 246
No external refs found!