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  5. Solyc07g006960

Solyc07g006960


Description : hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *** AT2G18910.1)


Gene families : OG_42_0007269 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g006960
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Bradi1g71450 No alias hydroxyproline-rich glycoprotein family protein 0.03 Orthogroups_2024-Update
Sopen07g003050 No alias FAM177 family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR028260 FAM177 92 127
No external refs found!