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  5. LOC_Os01g06530

LOC_Os01g06530


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000731 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g06530
Cluster HCCA clusters: cluster_0134

Target Alias Description ECC score Gene Family Method Actions
Bradi1g50963 No alias RNA-directed DNA polymerase (reverse... 0.02 Orthogroups_2024-Update
Bradi5g15081 No alias RNA-directed DNA polymerase (reverse... 0.02 Orthogroups_2024-Update
HORVU2Hr1G054010.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G050040.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G064900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G054890.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G059170.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 751 835
IPR000477 RT_dom 250 506
No external refs found!