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  5. LOC_Os01g06680

LOC_Os01g06680


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g06680
Cluster HCCA clusters: cluster_0062

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G111090.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.009G112000 No alias receptor like protein 6 0.02 Orthogroups_2024-Update
Potri.012G027400 No alias receptor like protein 35 0.03 Orthogroups_2024-Update
Sobic.003G162600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G141700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc12g099870 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Sopen03g006300 No alias Leucine rich repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 175 218
IPR013210 LRR_N_plant-typ 7 47
No external refs found!