Description : OsMADS3 - MADS-box family gene with MIKCc type-box, expressed
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os01g10504 | |
Cluster | HCCA clusters: cluster_0072 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_27621 | No alias | agamous-like mads-box protein agl9 | 0.02 | Orthogroups_2024-Update | |
At1g01530 | No alias | AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] | 0.02 | Orthogroups_2024-Update | |
At1g77980 | No alias | Agamous-like MADS-box protein AGL66... | 0.02 | Orthogroups_2024-Update | |
At4g09960 | No alias | K-box region and MADS-box transcription factor family... | 0.03 | Orthogroups_2024-Update | |
At5g20240 | No alias | Floral homeotic protein PISTILLATA... | 0.02 | Orthogroups_2024-Update | |
Brara.C00694.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.03 | Orthogroups_2024-Update | |
Brara.D01509.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
GRMZM2G018589 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.02G287700 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.03G019300 | No alias | AGAMOUS-like 20 | 0.03 | Orthogroups_2024-Update | |
Glyma.05G163200 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.07G081300 | No alias | AGAMOUS-like 6 | 0.02 | Orthogroups_2024-Update | |
Glyma.09G266400 | No alias | AGAMOUS-like 6 | 0.02 | Orthogroups_2024-Update | |
Glyma.20G136700 | No alias | AGAMOUS-like 62 | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G025700.6 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g52410 | No alias | OsMADS31 - MADS-box family gene with MIKCc type-box, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os09g02780 | No alias | OsMADS77 - MADS-box family gene with M-alpha type-box, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.004G064300 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Potri.004G130900 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
Potri.009G055700 | No alias | AGAMOUS-like 15 | 0.02 | Orthogroups_2024-Update | |
Pp1s209_130V6 | No alias | mads-box transcription factor | 0.02 | Orthogroups_2024-Update | |
Pp1s90_121V6 | No alias | mikc* mads-box transcription factor | 0.03 | Orthogroups_2024-Update | |
Solyc02g071730 | No alias | Tomato AGAMOUS 1 | 0.03 | Orthogroups_2024-Update | |
Solyc10g017630 | No alias | MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) | 0.03 | Orthogroups_2024-Update | |
Sopen01g026520 | No alias | SRF-type transcription factor (DNA-binding and... | 0.02 | Orthogroups_2024-Update | |
Sopen01g045900 | No alias | SRF-type transcription factor (DNA-binding and... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predicted GO |
CC | GO:0000808 | origin recognition complex | IEP | Predicted GO |
MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
CC | GO:0005666 | RNA polymerase III complex | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006383 | transcription by RNA polymerase III | IEP | Predicted GO |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
BP | GO:0006595 | polyamine metabolic process | IEP | Predicted GO |
BP | GO:0006596 | polyamine biosynthetic process | IEP | Predicted GO |
BP | GO:0006597 | spermine biosynthetic process | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
BP | GO:0008215 | spermine metabolic process | IEP | Predicted GO |
BP | GO:0008216 | spermidine metabolic process | IEP | Predicted GO |
BP | GO:0008295 | spermidine biosynthetic process | IEP | Predicted GO |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
MF | GO:0015267 | channel activity | IEP | Predicted GO |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predicted GO |
BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0097164 | ammonium ion metabolic process | IEP | Predicted GO |
No external refs found! |