Description : zinc finger, C3HC4 type domain containing protein, expressed
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os01g11460 | |
Cluster | HCCA clusters: cluster_0059 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_09968 | No alias | ring-h2 finger protein atl78 | 0.02 | Orthogroups_2024-Update | |
A4A49_35950 | No alias | e3 ubiquitin-protein ligase atl41 | 0.02 | Orthogroups_2024-Update | |
A4A49_37314 | No alias | e3 ubiquitin-protein ligase atl9 | 0.01 | Orthogroups_2024-Update | |
A4A49_59878 | No alias | ring-h2 finger protein atl60 | 0.04 | Orthogroups_2024-Update | |
At3g14320 | No alias | Putative RING-H2 finger protein ATL61... | 0.03 | Orthogroups_2024-Update | |
Brara.A00708.1 | No alias | regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) | 0.02 | Orthogroups_2024-Update | |
Brara.C03025.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Brara.E00283.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Brara.G00998.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.J02480.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
GRMZM2G090279 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G150832 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G324111 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G447566 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.03G203400 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
Glyma.04G215600 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.06G150400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.09G140800 | No alias | carbon/nitrogen insensitive 1 | 0.02 | Orthogroups_2024-Update | |
Glyma.09G264300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G060400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G069670.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G081150.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G004390.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G016710.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G022590.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
MA_10436208g0010 | No alias | (at1g72200 : 100.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
MA_41514g0010 | No alias | (at5g01880 : 91.3) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
MA_904294g0010 | No alias | (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
PSME_00003022-RA | No alias | (at1g72200 : 164.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
PSME_00011913-RA | No alias | (at3g51430 : 162.0) Although this enzyme is predicted to... | 0.01 | Orthogroups_2024-Update | |
Potri.002G006400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.011G063100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.019G130100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s38_53V6 | No alias | ring-h2 finger protein | 0.02 | Orthogroups_2024-Update | |
Pp1s41_270V6 | No alias | zinc finger (c3hc4-type ring finger) family protein | 0.01 | Orthogroups_2024-Update | |
Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.7G205000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G170300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G181300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sobic.004G283400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Solyc01g081040 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Solyc03g112340 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G05200.1) | 0.02 | Orthogroups_2024-Update | |
Sopen01g040370 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen08g025350 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Predicted GO |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005732 | small nucleolar ribonucleoprotein complex | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | Predicted GO |
BP | GO:0008037 | cell recognition | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predicted GO |
MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
BP | GO:0022414 | reproductive process | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0033218 | amide binding | IEP | Predicted GO |
MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
BP | GO:0034311 | diol metabolic process | IEP | Predicted GO |
BP | GO:0034312 | diol biosynthetic process | IEP | Predicted GO |
CC | GO:0034457 | Mpp10 complex | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044452 | nucleolar part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | Predicted GO |
BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
BP | GO:0048544 | recognition of pollen | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
MF | GO:1901567 | fatty acid derivative binding | IEP | Predicted GO |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 98 | 141 |
No external refs found! |