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  5. LOC_Os01g11480

LOC_Os01g11480


Description : zinc finger, C3HC4 type domain containing protein, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g11480
Cluster HCCA clusters: cluster_0114

Target Alias Description ECC score Gene Family Method Actions
A4A49_08432 No alias ring-h2 finger protein atl70 0.03 Orthogroups_2024-Update
A4A49_11165 No alias ring-h2 finger protein atl8 0.03 Orthogroups_2024-Update
A4A49_19370 No alias ring-h2 finger protein atl70 0.01 Orthogroups_2024-Update
A4A49_31261 No alias ring-h2 finger protein atl70 0.02 Orthogroups_2024-Update
A4A49_40065 No alias ring-h2 finger protein atl70 0.03 Orthogroups_2024-Update
At1g72220 No alias RING-H2 finger protein ATL54... 0.03 Orthogroups_2024-Update
Bradi2g26383 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g49152 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g05840 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g52160 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.E00038.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.K00768.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G386584 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G263000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G098100 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G181300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G214600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G121100 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G069670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G042940.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10436208g0010 No alias (at1g72200 : 100.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_904294g0010 No alias (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
PSME_00003023-RA No alias (at1g72200 : 141.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00022170-RA No alias (at1g53820 : 134.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00054098-RA No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G113200 No alias receptor homology region transmembrane domain ring H2... 0.02 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G219200 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.012G003900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G067900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G017700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.1G306500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.1G327300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.3G023500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.3G209600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G374600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Seita.4G172100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G309700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.9G410900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G345400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.003G288401.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G110300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G181400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc10g008080 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G42350.1) 0.03 Orthogroups_2024-Update
Solyc11g005290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 100 143
No external refs found!