Description : zinc finger, C3HC4 type domain containing protein, expressed
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os01g11490 | |
Cluster | HCCA clusters: cluster_0062 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_35950 | No alias | e3 ubiquitin-protein ligase atl41 | 0.02 | Orthogroups_2024-Update | |
At3g05200 | No alias | E3 ubiquitin-protein ligase ATL6... | 0.03 | Orthogroups_2024-Update | |
Bradi2g49152 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi5g11880 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.C03092.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.F02551.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Glyma.05G188900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.18G014600 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.19G236800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g58540 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.001G279200 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Orthogroups_2024-Update | |
Pp1s185_21V6 | No alias | zinc finger (c3hc4-type ring finger) family protein | 0.02 | Orthogroups_2024-Update | |
Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.5G023000.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.002G233000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G109100.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0010181 | FMN binding | IEP | Predicted GO |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0097747 | RNA polymerase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 142 | 185 |
No external refs found! |