LOC_Os01g11490


Description : zinc finger, C3HC4 type domain containing protein, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g11490
Cluster HCCA clusters: cluster_0062

Target Alias Description ECC score Gene Family Method Actions
A4A49_35950 No alias e3 ubiquitin-protein ligase atl41 0.02 Orthogroups_2024-Update
At3g05200 No alias E3 ubiquitin-protein ligase ATL6... 0.03 Orthogroups_2024-Update
Bradi2g49152 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g11880 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.C03092.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F02551.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.05G188900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G014600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G236800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os02g58540 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G279200 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Pp1s185_21V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.02 Orthogroups_2024-Update
Seita.2G238400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.5G023000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G233000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G109100.3 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 142 185
No external refs found!