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  5. LOC_Os01g12680

LOC_Os01g12680


Description : C4-dicarboxylate transporter/malic acid transport protein, expressed


Gene families : OG_42_0000546 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g12680
Cluster HCCA clusters: cluster_0041

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G027300 No alias SLAC1 homologue 1 0.04 Orthogroups_2024-Update
Glyma.12G097300 No alias SLAC1 homologue 1 0.01 Orthogroups_2024-Update
HORVU3Hr1G033800.1 No alias anion channel *(SLAC) 0.02 Orthogroups_2024-Update
Potri.012G035300 No alias SLAC1 homologue 3 0.02 Orthogroups_2024-Update
Potri.015G026700 No alias SLAC1 homologue 3 0.03 Orthogroups_2024-Update
Sobic.009G248600.1 No alias anion channel *(SLAC) 0.03 Orthogroups_2024-Update
Sopen09g007450 No alias Voltage-dependent anion channel 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004695 Voltage-dep_anion_channel 306 609
No external refs found!