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  5. LOC_Os01g16170

LOC_Os01g16170


Description : PQ loop repeat domain containing protein, expressed


Gene families : OG_42_0001884 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001884_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g16170
Cluster HCCA clusters: cluster_0074

Target Alias Description ECC score Gene Family Method Actions
121256 No alias PQ-loop repeat family protein / transmembrane family protein 0.02 Orthogroups_2024-Update
A4A49_10569 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi2g09940 No alias PQ-loop repeat family protein / transmembrane family protein 0.03 Orthogroups_2024-Update
Brara.A00188.1 No alias non-specific cation channel *(PQL1) 0.04 Orthogroups_2024-Update
HORVU3Hr1G037780.2 No alias non-specific cation channel *(PQL1) 0.02 Orthogroups_2024-Update
Mp1g08130.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Mp3g06260.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00019325-RA No alias (at2g41050 : 249.0) PQ-loop repeat family protein /... 0.03 Orthogroups_2024-Update
PSME_00031097-RA No alias (at4g36850 : 242.0) PQ-loop repeat family protein /... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004363 glutathione synthase activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006603 PQ-loop_rpt 42 94
IPR006603 PQ-loop_rpt 315 373
No external refs found!