- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Alkaline alpha-galactosidase seed imbibition protein (AHRD V3.3 *** Q8H6N3_SOLLC)
Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc07g007930 | |
| Cluster | HCCA clusters: Cluster_87 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi5g13570 | No alias | seed imbibition 2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.14G010500 | No alias | seed imbibition 1 | 0.03 | Orthogroups_2024-Update | |
| PSME_00005466-RA | No alias | (at5g20250 : 946.0) encodes a member of glycosyl... | 0.03 | Orthogroups_2024-Update | |
| PSME_00025208-RA | No alias | (at1g55740 : 1032.0) seed imbibition 1 (SIP1); CONTAINS... | 0.03 | Orthogroups_2024-Update | |
| PSME_00026740-RA | No alias | (at5g20250 : 246.0) encodes a member of glycosyl... | 0.02 | Orthogroups_2024-Update | |
| Pp1s8_24V6 | No alias | stachyose synthase | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000045 | autophagosome assembly | IEP | Predicted GO |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0004096 | catalase activity | IEP | Predicted GO |
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Predicted GO |
| MF | GO:0004470 | malic enzyme activity | IEP | Predicted GO |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Predicted GO |
| MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | Predicted GO |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
| MF | GO:0004629 | phospholipase C activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0007033 | vacuole organization | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
| BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
| BP | GO:0030259 | lipid glycosylation | IEP | Predicted GO |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
| BP | GO:1905037 | autophagosome organization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008811 | Glycosyl_hydrolases_36 | 108 | 857 |
| No external refs found! |