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  5. LOC_Os01g17396

LOC_Os01g17396


Description : expressed protein


Gene families : OG_42_0012338 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g17396
Cluster HCCA clusters: cluster_0071

Target Alias Description ECC score Gene Family Method Actions
Bradi2g10880 No alias Function unknown 0.03 Orthogroups_2024-Update
GRMZM2G304091 No alias dentin sialophosphoprotein-related 0.02 Orthogroups_2024-Update
HORVU3Hr1G040870.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G038300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G134400.3 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!