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  5. LOC_Os01g18650

LOC_Os01g18650


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os01g18650
Cluster HCCA clusters: cluster_0144

Target Alias Description ECC score Gene Family Method Actions
Bradi3g24662 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.G02929.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g08340 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g15830 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 635 716
IPR025525 hAT-like_transposase_RNase-H 483 583
No external refs found!