LOC_Os01g19050

Description : transposon protein, putative, unclassified, expressed

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g19050
Cluster	HCCA clusters: cluster_0086

Target	Alias	Description	ECC score	Gene Family Method
Bradi5g09126	No alias	FAR1-related sequence 5	0.03	Orthogroups_2024-Update
Solyc06g068200	No alias	Far1-related sequence 6 (AHRD V3.3 *** A0A061G8J5_THECC)	0.02	Orthogroups_2024-Update
Solyc06g068210	No alias	Protein FAR1-RELATED SEQUENCE 8 (AHRD V3.3 *** W9RSB0_9ROSA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR018289	MULE_transposase_dom	414	507
IPR004330	FAR1_DNA_bnd_dom	212	291
IPR007527	Znf_SWIM	696	729

External Links

No external refs found!