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  5. LOC_Os01g21630

LOC_Os01g21630


Description : pectinacetylesterase domain containing protein, expressed


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g21630
Cluster HCCA clusters: cluster_0111

Target Alias Description ECC score Gene Family Method Actions
A4A49_36028 No alias pectin acetylesterase 8 0.02 Orthogroups_2024-Update
LOC_Os01g74330 No alias pectinacetylesterase domain containing protein, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 53 400
No external refs found!