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  5. LOC_Os01g23530

LOC_Os01g23530


Description : terpene synthase, putative, expressed


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g23530
Cluster HCCA clusters: cluster_0061

Target Alias Description ECC score Gene Family Method Actions
A4A49_20624 No alias viridiflorene synthase 0.02 Orthogroups_2024-Update
A4A49_36773 No alias germacrene c synthase 0.02 Orthogroups_2024-Update
At1g31950 No alias Terpenoid cyclases/Protein prenyltransferases... 0.04 Orthogroups_2024-Update
At3g29410 No alias Terpenoid synthase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA1] 0.03 Orthogroups_2024-Update
At4g20200 No alias Putative terpenoid synthase 7... 0.03 Orthogroups_2024-Update
Glyma.12G138800 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
LOC_Os04g27540 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g27670 No alias terpene synthase family, metal binding domain containing... 0.04 Orthogroups_2024-Update
Potri.007G074400 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
Potri.019G000400 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
Potri.T000400 No alias terpene synthase 21 0.04 Orthogroups_2024-Update
Seita.6G066400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Sobic.007G187100.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Sopen07g025530 No alias Terpene synthase family, metal binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 35 201
IPR005630 Terpene_synthase_metal-bd 232 490
No external refs found!