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  5. LOC_Os01g24680

LOC_Os01g24680


Description : 3-hydroxyacyl-CoA dehydrogenase, putative, expressed


Gene families : OG_42_0001149 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g24680
Cluster HCCA clusters: cluster_0094

Target Alias Description ECC score Gene Family Method Actions
Pp1s75_175V6 No alias peroxisomal fatty acid beta-oxidation multifunctional protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEA InterProScan predictions
BP GO:0006631 fatty acid metabolic process IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR006108 3HC_DH_C 497 590
IPR006108 3HC_DH_C 629 709
IPR006176 3-OHacyl-CoA_DH_NAD-bd 316 494
IPR001753 Enoyl-CoA_hydra/iso 18 210
No external refs found!