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  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g008750

Solyc07g008750


Description : Nuclear nucleic acid-binding protein C1D (AHRD V3.3 *** A0A0B0NSY9_GOSAR)


Gene families : OG_42_0004594 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004594_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g008750
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Solyc06g064740 No alias LOW QUALITY:Nuclear nucleic acid-binding protein C1D... 0.03 Orthogroups_2024-Update
Sopen07g029020 No alias hypothetical protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!