Description : expressed protein
Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os01g27690 | |
Cluster | HCCA clusters: cluster_0062 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
HORVU2Hr1G097040.19 | No alias | mTERF-type transcription factor | 0.02 | Orthogroups_2024-Update | |
MA_205355g0010 | No alias | (at5g64950 : 101.0) Mitochondrial transcription... | 0.02 | Orthogroups_2024-Update | |
PSME_00056194-RA | No alias | (at5g64950 : 106.0) Mitochondrial transcription... | 0.01 | Orthogroups_2024-Update | |
Seita.3G248800.1 | No alias | mTERF-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Seita.4G094400.1 | No alias | mTERF-type transcription factor | 0.01 | Orthogroups_2024-Update | |
Sobic.006G183301.1 | No alias | mTERF-type transcription factor | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
BP | GO:0009607 | response to biotic stimulus | IEP | Predicted GO |
BP | GO:0009620 | response to fungus | IEP | Predicted GO |
BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0016197 | endosomal transport | IEP | Predicted GO |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
BP | GO:0016482 | cytosolic transport | IEP | Predicted GO |
CC | GO:0030906 | retromer, cargo-selective complex | IEP | Predicted GO |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Predicted GO |
BP | GO:0043207 | response to external biotic stimulus | IEP | Predicted GO |
BP | GO:0050832 | defense response to fungus | IEP | Predicted GO |
BP | GO:0051704 | multi-organism process | IEP | Predicted GO |
BP | GO:0051707 | response to other organism | IEP | Predicted GO |
BP | GO:0098542 | defense response to other organism | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003690 | MTERF | 87 | 139 |
No external refs found! |