Description : retrotransposon, putative, centromere-specific, expressed
Gene families : OG_42_0000239 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000239_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os01g28360 | |
Cluster | HCCA clusters: cluster_0125 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g31950 | No alias | F-box family protein | 0.02 | Orthogroups_2024-Update | |
Bradi3g44271 | No alias | F-box family protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G110057 | No alias | F-box family protein | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G003000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.5G454500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
MF | GO:0043531 | ADP binding | IEP | Predicted GO |
MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |