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  5. LOC_Os01g29280

LOC_Os01g29280


Description : expressed protein


Gene families : OG_42_0000299 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g29280
Cluster HCCA clusters: cluster_0124

Target Alias Description ECC score Gene Family Method Actions
A4A49_32516 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.A00946.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.A02769.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G070013 No alias Protein of unknown function (DUF679) 0.02 Orthogroups_2024-Update
Glyma.13G175000 No alias Protein of unknown function (DUF679) 0.03 Orthogroups_2024-Update
MA_10186862g0010 No alias (at3g21520 : 135.0) DUF679 domain membrane protein 1... 0.02 Orthogroups_2024-Update
Potri.003G008600 No alias Protein of unknown function (DUF679) 0.03 Orthogroups_2024-Update
Seita.3G147300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G128900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g045930 No alias Protein of unknown function (DUF679) 0.03 Orthogroups_2024-Update
Sopen10g021350 No alias Protein of unknown function (DUF679) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007770 DMP 75 242
No external refs found!