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  5. Solyc07g008950

Solyc07g008950


Description : Methionyl-tRNA synthetase family protein (AHRD V3.3 *** B9N0S4_POPTR)


Gene families : OG_42_0003418 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g008950
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Bradi1g69880 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.02 Orthogroups_2024-Update
Bradi3g31100 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.02 Orthogroups_2024-Update
Brara.D00698.1 No alias EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase 0.04 Orthogroups_2024-Update
HORVU4Hr1G067650.2 No alias EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase 0.03 Orthogroups_2024-Update
Kfl00458_0010 kfl00458_0010_v1.1 (at4g13780 : 964.0) methionine--tRNA ligase, putative /... 0.03 Orthogroups_2024-Update
Pp1s107_189V6 No alias methionyl-trna synthetase 0.02 Orthogroups_2024-Update
Seita.9G490200.1 No alias EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase 0.05 Orthogroups_2024-Update
Sobic.001G455800.1 No alias EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA InterProScan predictions
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 28 422
IPR002547 tRNA-bd_dom 649 743
No external refs found!