1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g29430

LOC_Os01g29430


Description : tetratricopeptide-like helical, putative, expressed


Gene families : OG_42_0010026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010026_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g29430
Cluster HCCA clusters: cluster_0130


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 372 418
IPR002885 Pentatricopeptide_repeat 106 149
IPR002885 Pentatricopeptide_repeat 79 105
IPR002885 Pentatricopeptide_repeat 479 503
IPR002885 Pentatricopeptide_repeat 210 235
IPR002885 Pentatricopeptide_repeat 449 473
IPR002885 Pentatricopeptide_repeat 551 575
IPR002885 Pentatricopeptide_repeat 513 540
IPR002885 Pentatricopeptide_repeat 344 371
IPR002885 Pentatricopeptide_repeat 241 267
No external refs found!