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  5. LOC_Os01g35050

LOC_Os01g35050


Description : early-responsive to dehydration protein-related, putative, expressed


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g35050
Cluster HCCA clusters: cluster_0079

Target Alias Description ECC score Gene Family Method Actions
41460 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
A4A49_09861 No alias csc1-like protein rxw8 0.02 Orthogroups_2024-Update
Brara.F00887.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
GRMZM2G049368 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
GRMZM6G732597 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
Glyma.02G271300 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Glyma.13G002200 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
Glyma.18G262600 No alias hypothetical protein 1 0.02 Orthogroups_2024-Update
Glyma.20G066800 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G063620.3 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.02 Orthogroups_2024-Update
PSME_00017239-RA No alias (at1g30360 : 733.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
Pp1s213_49V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Pp1s68_134V6 No alias erd4 protein 0.02 Orthogroups_2024-Update
Pp1s96_240V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Solyc09g064810 No alias ERD (early-responsive to dehydration stress) family... 0.02 Orthogroups_2024-Update
Sopen02g025700 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update
evm.model.contig_544.9 No alias (at3g21620 : 101.0) ERD (early-responsive to dehydration... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004358 glutamate N-acetyltransferase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 197 359
IPR032880 Csc1_N 7 176
IPR003864 RSN1_7TM 370 642
No external refs found!