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  5. LOC_Os01g38660

LOC_Os01g38660


Description : expressed protein


Gene families : OG_42_0000905 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000905_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g38660
Cluster HCCA clusters: cluster_0113

Target Alias Description ECC score Gene Family Method Actions
A4A49_03470 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At2g19460 No alias Protein of unknown function (DUF3511) [Source:TAIR;Acc:AT2G19460] 0.03 Orthogroups_2024-Update
Bradi1g37742 No alias Protein of unknown function (DUF3511) 0.03 Orthogroups_2024-Update
Brara.C03499.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G058075 No alias Protein of unknown function (DUF3511) 0.02 Orthogroups_2024-Update
Glyma.15G026000 No alias Protein of unknown function (DUF3511) 0.02 Orthogroups_2024-Update
HORVU3Hr1G047690.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G441000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G025400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G433000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
CC GO:0008274 gamma-tubulin ring complex IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0030975 thiamine binding IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR021899 DUF3511 104 147
No external refs found!