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  5. LOC_Os01g40410

LOC_Os01g40410


Description : transmembrane amino acid transporter protein, putative, expressed


Gene families : OG_42_0000219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g40410
Cluster HCCA clusters: cluster_0022

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G130500 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
Glyma.20G036300 No alias Transmembrane amino acid transporter family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G069080.4 No alias solute transporter *(AAAP) 0.02 Orthogroups_2024-Update
Sobic.006G106700.1 No alias solute transporter *(AAAP) 0.02 Orthogroups_2024-Update
Solyc03g063050 No alias Amino acid transporter, putative (AHRD V3.3 *** B9SY73_RICCO) 0.02 Orthogroups_2024-Update
evm.model.tig00020554.8 No alias (at2g39130 : 153.0) Transmembrane amino acid transporter... 0.01 Orthogroups_2024-Update
evm.model.tig00020614.123 No alias (at2g39130 : 153.0) Transmembrane amino acid transporter... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 68 452
No external refs found!