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  5. LOC_Os01g41220

LOC_Os01g41220


Description : DUF538 domain containing protein, putative, expressed


Gene families : OG_42_0000796 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000796_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g41220
Cluster HCCA clusters: cluster_0070

Target Alias Description ECC score Gene Family Method Actions
77415 No alias Protein of unknown function, DUF538 0.03 Orthogroups_2024-Update
At5g19590 No alias At5g19590 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ9] 0.05 Orthogroups_2024-Update
Bradi4g40500 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update
Brara.I00149.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J00132.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.10G017400 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update
LOC_Os12g09620 No alias expressed protein 0.04 Orthogroups_2024-Update
PSME_00002739-RA No alias (at5g19590 : 119.0) Protein of unknown function, DUF538;... 0.03 Orthogroups_2024-Update
Potri.014G127500 No alias Protein of unknown function, DUF538 0.03 Orthogroups_2024-Update
Sopen09g030050 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007493 DUF538 41 148
No external refs found!