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  5. LOC_Os01g42520

LOC_Os01g42520


Description : expressed protein


Gene families : OG_42_0000355 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g42520
Cluster HCCA clusters: cluster_0098

Target Alias Description ECC score Gene Family Method Actions
Brara.E03158.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F02741.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G034985 No alias Protein of unknown function, DUF642 0.04 Orthogroups_2024-Update
Kfl00022_0180 kfl00022_0180_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_44504g0020 No alias (at2g34510 : 439.0) FUNCTIONS IN: molecular_function... 0.02 Orthogroups_2024-Update
PSME_00000030-RA No alias (at2g34510 : 371.0) FUNCTIONS IN: molecular_function... 0.03 Orthogroups_2024-Update
PSME_00007060-RA No alias (at1g29980 : 206.0) INVOLVED IN: biological_process... 0.04 Orthogroups_2024-Update
Potri.018G031100 No alias Protein of unknown function, DUF642 0.04 Orthogroups_2024-Update
Seita.5G223100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR006946 DUF642 26 183
IPR006946 DUF642 194 357
No external refs found!