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  5. LOC_Os01g42700

LOC_Os01g42700


Description : expressed protein


Gene families : OG_42_0000519 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g42700
Cluster HCCA clusters: cluster_0033

Target Alias Description ECC score Gene Family Method Actions
96486 No alias Protein of unknown function (DUF1644) 0.01 Orthogroups_2024-Update
A4A49_27300 No alias hypothetical protein 0.02 Orthogroups_2024-Update
A4A49_27677 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At3g25910 No alias AT3g25910/MPE11_6 [Source:UniProtKB/TrEMBL;Acc:Q9LUA0] 0.02 Orthogroups_2024-Update
Bradi5g01310 No alias Protein of unknown function (DUF1644) 0.01 Orthogroups_2024-Update
Brara.G00650.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.08G078300 No alias Protein of unknown function (DUF1644) 0.03 Orthogroups_2024-Update
Glyma.11G222000 No alias Protein of unknown function (DUF1644) 0.02 Orthogroups_2024-Update
LOC_Os06g47860 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.006G275400 No alias Protein of unknown function (DUF1644) 0.03 Orthogroups_2024-Update
Pp1s53_148V6 No alias K7P8.3; expressed protein [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update
Pp1s72_271V6 No alias K7P8.3; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR012866 DUF1644 52 207
No external refs found!