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  5. LOC_Os01g43180

LOC_Os01g43180


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0002018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g43180
Cluster HCCA clusters: cluster_0095

Target Alias Description ECC score Gene Family Method Actions
A4A49_25233 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.C02876.1 No alias R3-MYB transcription factor 0.03 Orthogroups_2024-Update
Glyma.12G100600 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.002G168900 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G022000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 62 100
No external refs found!