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  5. LOC_Os01g45400

LOC_Os01g45400


Description : ubiquitin family protein, putative, expressed


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os01g45400
Cluster HCCA clusters: cluster_0014

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467567 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
GRMZM2G005461 No alias ubiquitin 9 0.03 Orthogroups_2024-Update
Glyma.17G042100 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
HORVU6Hr1G021700.4 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Mp4g02730.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Seita.4G265000.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 79 150
No external refs found!