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  5. LOC_Os01g47070

LOC_Os01g47070


Description : glycosyl hydrolase, putative, expressed


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g47070
Cluster HCCA clusters: cluster_0021

Target Alias Description ECC score Gene Family Method Actions
A4A49_02633 No alias acidic endochitinase 0.03 Orthogroups_2024-Update
A4A49_40427 No alias hevamine-a 0.02 Orthogroups_2024-Update
At5g24090 No alias Acidic endochitinase [Source:UniProtKB/Swiss-Prot;Acc:P19172] 0.04 Orthogroups_2024-Update
Bradi2g43755 No alias chitinase A 0.03 Orthogroups_2024-Update
Bradi2g55610 No alias chitinase A 0.03 Orthogroups_2024-Update
Brara.F02630.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Glyma.07G061600 No alias chitinase A 0.03 Orthogroups_2024-Update
Glyma.12G156600 No alias chitinase A 0.03 Orthogroups_2024-Update
Glyma.18G120200 No alias chitinase A 0.03 Orthogroups_2024-Update
Glyma.20G164700 No alias chitinase A 0.02 Orthogroups_2024-Update
Mp2g01600.1 No alias Acidic endochitinase SE2 OS=Beta vulgaris... 0.02 Orthogroups_2024-Update
Mp2g08740.1 No alias Acidic endochitinase SE2 OS=Beta vulgaris... 0.02 Orthogroups_2024-Update
Potri.015G024200 No alias chitinase A 0.04 Orthogroups_2024-Update
Seita.5G389800.1 No alias acidic chitinase *(CHIA) 0.05 Orthogroups_2024-Update
Sobic.003G244600.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Sobic.003G363900.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Solyc01g095250 No alias Acidic endochitinase (AHRD V3.3 *** W9R015_9ROSA) 0.03 Orthogroups_2024-Update
Solyc01g095260 No alias Acidic endochitinase (AHRD V3.3 *** W9R015_9ROSA) 0.02 Orthogroups_2024-Update
Solyc05g050130 No alias Acidic endochitinase (AHRD V3.3 *** CHIA_TOBAC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 29 286
No external refs found!