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  5. LOC_Os01g47130

LOC_Os01g47130


Description : expressed protein


Gene families : OG_42_0001103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g47130
Cluster HCCA clusters: cluster_0126

Target Alias Description ECC score Gene Family Method Actions
AC234148.1_FG001 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi2g15995 No alias Function unknown 0.02 Orthogroups_2024-Update
LOC_Os05g46160 No alias OsFBDUF29 - F-box and DUF domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.3G140000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G183100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR005174 DUF295 319 380
No external refs found!