LOC_Os01g47560

Description : WRKY16, expressed

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g47560
Cluster	HCCA clusters: cluster_0102

Target	Alias	Description	ECC score	Gene Family Method
At1g80840	No alias	Probable WRKY transcription factor 40...	0.02	Orthogroups_2024-Update
Bradi2g15877	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi4g45290	No alias	WRKY family transcription factor family protein	0.03	Orthogroups_2024-Update
Brara.A01386.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.02G232600	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Glyma.06G147500	No alias	WRKY DNA-binding protein 13	0.03	Orthogroups_2024-Update
Glyma.08G142400	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Glyma.12G212300	No alias	WRKY DNA-binding protein 69	0.03	Orthogroups_2024-Update
Glyma.19G217000	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
HORVU1Hr1G070250.2	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G050590.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G059220.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
PSME_00011302-RA	No alias	(at4g01720 : 92.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00037996-RA	No alias	(at5g43290 : 110.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.014G155100	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Seita.4G163600.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G361700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.8G187900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G199400.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predicted GO
BP	GO:0043631	RNA polyadenylation	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	370	427

External Links

No external refs found!

LOC_Os01g47560

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation