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LOC_Os01g48410


Description : ATROPGEF7/ROPGEF7, putative, expressed


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g48410
Cluster HCCA clusters: cluster_0021

Target Alias Description ECC score Gene Family Method Actions
Potri.005G247100 No alias rho guanyl-nucleotide exchange factor 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 119 466
No external refs found!