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  5. Solyc07g017730

Solyc07g017730


Description : Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9RR12_RICCO)


Gene families : OG_42_0000342 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g017730
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
A4A49_21611 No alias glucan endo-1,3-beta-glucosidase 6 0.03 Orthogroups_2024-Update
A4A49_29920 No alias glucan endo-1,3-beta-glucosidase 5 0.09 Orthogroups_2024-Update
PSME_00035151-RA No alias (at1g64760 : 568.0) O-Glycosyl hydrolases family 17... 0.03 Orthogroups_2024-Update
Potri.006G216700 No alias O-Glycosyl hydrolases family 17 protein 0.02 Orthogroups_2024-Update
Potri.006G280400 No alias O-Glycosyl hydrolases family 17 protein 0.02 Orthogroups_2024-Update
Potri.013G059700 No alias O-Glycosyl hydrolases family 17 protein 0.03 Orthogroups_2024-Update
Pp1s14_30V6 No alias glucan endo- -beta-glucosidase 0.02 Orthogroups_2024-Update
Seita.9G150500.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sopen07g006550 No alias Glycosyl hydrolases family 17 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 39 357
IPR012946 X8 376 441
No external refs found!