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  5. Solyc01g006950

Solyc01g006950


Description : Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO)


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g006950
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
443146 No alias syntaxin of plants 131 0.02 Orthogroups_2024-Update
74098 No alias syntaxin of plants 124 0.05 Orthogroups_2024-Update
93442 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
A4A49_24964 No alias syntaxin-121 0.06 Orthogroups_2024-Update
Bradi4g05940 No alias syntaxin of plants 131 0.02 Orthogroups_2024-Update
GRMZM2G029270 No alias syntaxin of plants 124 0.05 Orthogroups_2024-Update
GRMZM2G414540 No alias syntaxin of plants 121 0.05 Orthogroups_2024-Update
HORVU2Hr1G043130.15 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
LOC_Os03g52650 No alias syntaxin-related protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g07200 No alias syntaxin, putative, expressed 0.03 Orthogroups_2024-Update
MA_28961g0010 No alias (at1g11250 : 290.0) member of SYP12 Gene Family;... 0.06 Orthogroups_2024-Update
PSME_00018503-RA No alias (at1g08560 : 208.0) member of SYP11 syntaxin Gene... 0.02 Orthogroups_2024-Update
PSME_00055228-RA No alias (at4g33990 : 129.0) embryo defective 2758 (EMB2758);... 0.03 Orthogroups_2024-Update
Potri.006G202200 No alias syntaxin of plants 121 0.03 Orthogroups_2024-Update
Potri.016G068600 No alias syntaxin of plants 121 0.04 Orthogroups_2024-Update
Seita.9G063400.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.05 Orthogroups_2024-Update
Sobic.001G064900.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.06 Orthogroups_2024-Update
Sopen07g026100 No alias SNARE domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 240 292
IPR006011 Syntaxin_N 34 239
No external refs found!