Description : Galactose oxidase/kelch repeat superfamily protein (AHRD V3.3 *** AT5G57360.1)
Gene families : OG_42_0002411 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002411_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc07g017750 | |
Cluster | HCCA clusters: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.G00140.1 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(ADO) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G099010.1 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(ADO) | 0.03 | Orthogroups_2024-Update | |
Sopen07g006570 | No alias | Galactose oxidase, central domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Predicted GO |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0044093 | positive regulation of molecular function | IEP | Predicted GO |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Predicted GO |
BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001810 | F-box_dom | 126 | 170 |
No external refs found! |