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  5. LOC_Os01g50616

LOC_Os01g50616


Description : phosphatidylinositol transfer, putative, expressed


Gene families : OG_42_0000289 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000289_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g50616
Cluster HCCA clusters: cluster_0123

Target Alias Description ECC score Gene Family Method Actions
At4g34580 No alias SRH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V672] 0.02 Orthogroups_2024-Update
Brara.A00365.1 No alias phosphoinositide transfer protein *(SFH) 0.02 Orthogroups_2024-Update
Brara.D01268.1 No alias phosphoinositide transfer protein *(SFH) 0.03 Orthogroups_2024-Update
GRMZM2G073571 No alias Sec14p-like phosphatidylinositol transfer family protein 0.04 Orthogroups_2024-Update
Pp1s88_63V6 No alias sec14 cytosolic 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011074 CRAL/TRIO_N_dom 181 207
IPR001251 CRAL-TRIO_dom 232 397
No external refs found!