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  5. LOC_Os01g51990

LOC_Os01g51990


Description : AN1-like zinc finger domain containing protein, expressed


Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g51990
Cluster HCCA clusters: cluster_0055

Target Alias Description ECC score Gene Family Method Actions
At4g25380 No alias Zinc finger A20 and AN1 domain-containing... 0.02 Orthogroups_2024-Update
Brara.A02761.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D00571.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03583.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.11G153700 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.13G317250 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.18G255100 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G022940.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G155901.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!