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LOC_Os01g52110


Description : RING finger and CHY zinc finger domain-containing protein 1, putative, expressed


Gene families : OG_42_0001040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g52110
Cluster HCCA clusters: cluster_0028

Target Alias Description ECC score Gene Family Method Actions
Brara.C01022.1 No alias E3 ubiquitin ligase *(CHY) 0.02 Orthogroups_2024-Update
Seita.9G541500.1 No alias E3 ubiquitin ligase *(CHY) 0.03 Orthogroups_2024-Update
Sobic.001G230700.1 No alias E3 ubiquitin ligase *(CHY) 0.03 Orthogroups_2024-Update
Sopen06g035890 No alias Zinc-ribbon 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008913 Znf_CHY 61 142
IPR039512 RCHY1_zinc-ribbon 244 300
IPR001841 Znf_RING 196 239
No external refs found!