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  5. Solyc07g017950

Solyc07g017950


Description : Ribulose bisphosphate carboxylase small chain (AHRD V3.3 *** K4CCK9_SOLLC)


Gene families : OG_42_0000599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g017950
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
147927 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.03 Orthogroups_2024-Update
LOC_Os02g05830 No alias ribulose bisphosphate carboxylase small chain,... 0.02 Orthogroups_2024-Update
LOC_Os12g19381 No alias ribulose bisphosphate carboxylase small chain,... 0.04 Orthogroups_2024-Update
Sopen03g007000 No alias Ribulose bisphosphate carboxylase, small chain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000894 RuBisCO_sc_dom 60 167
No external refs found!