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  5. LOC_Os01g54590

LOC_Os01g54590


Description : ras-related protein, putative, expressed


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g54590
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
A4A49_29337 No alias ras-related protein raba3 0.03 Orthogroups_2024-Update
At1g01200 No alias RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7] 0.02 Orthogroups_2024-Update
Brara.H00953.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
Brara.I05362.1 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
Brara.J00061.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
Glyma.01G080300 No alias RAB GTPase homolog A4D 0.02 Orthogroups_2024-Update
Glyma.05G176300 No alias RAB GTPase homolog A4A 0.04 Orthogroups_2024-Update
Glyma.13G293200 No alias RAB GTPase homolog A1F 0.03 Orthogroups_2024-Update
HORVU1Hr1G033390.3 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
LOC_Os03g62600 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g44070 No alias ras-related protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_129080g0010 No alias (q39434|rb2bv_betvu : 338.0) Ras-related protein Rab2BV... 0.03 Orthogroups_2024-Update
Potri.001G270100 No alias RAB GTPase homolog A4D 0.02 Orthogroups_2024-Update
Potri.001G374000 No alias RAB GTPase homolog A1F 0.02 Orthogroups_2024-Update
Potri.011G070300 No alias RAB GTPase homolog A1C 0.03 Orthogroups_2024-Update
Sobic.009G003800.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Solyc11g010100 No alias Ras-related protein Rab11D (AHRD V3.3 *** RB11D_TOBAC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 20 180
No external refs found!