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  5. LOC_Os01g55200

LOC_Os01g55200


Description : potassium channel KAT1, putative, expressed


Gene families : OG_42_0000182 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g55200
Cluster HCCA clusters: cluster_0015

Target Alias Description ECC score Gene Family Method Actions
Bradi2g06750 No alias potassium channel in Arabidopsis thaliana 1 0.02 Orthogroups_2024-Update
Cre02.g098750 No alias STELAR K+ outward rectifier 0.01 Orthogroups_2024-Update
HORVU3Hr1G068040.1 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.02 Orthogroups_2024-Update
Kfl00043_0330 kfl00043_0330_v1.1 (at5g37500 : 347.0) Encodes a guard cell outward... 0.01 Orthogroups_2024-Update
Pp1s22_165V6 No alias potassium channel 0.02 Orthogroups_2024-Update
Sobic.003G300600.1 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.03 Orthogroups_2024-Update
Solyc05g051220 No alias Potassium channel TORK1 (AHRD V3.3 *** Q5NT78_TOBAC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Predicted GO
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 64 310
IPR000595 cNMP-bd_dom 401 486
No external refs found!