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  5. LOC_Os01g55549

LOC_Os01g55549


Description : homeobox and START domains containing protein, putative, expressed


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g55549
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Brara.E01141.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K01431.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G035230.3 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
HORVU7Hr1G073450.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Sopen09g021360 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 312 538
IPR001356 Homeobox_dom 96 151
No external refs found!