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Description : TCP family transcription factor, putative, expressed
Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os01g55750 | |
| Cluster | HCCA clusters: cluster_0092 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.13G292500 | No alias | TCP family transcription factor 4 | 0.02 | Orthogroups_2024-Update | |
| Glyma.19G044400 | No alias | TCP family transcription factor | 0.02 | Orthogroups_2024-Update | |
| Mp1g19590.1 | No alias | transcription factor (TCP) | 0.02 | Orthogroups_2024-Update | |
| Seita.3G181900.1 | No alias | TCP-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| Solyc06g069240 | No alias | branched1b | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003997 | acyl-CoA oxidase activity | IEP | Predicted GO |
| MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | Predicted GO |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Predicted GO |
| CC | GO:0005777 | peroxisome | IEP | Predicted GO |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006635 | fatty acid beta-oxidation | IEP | Predicted GO |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0009062 | fatty acid catabolic process | IEP | Predicted GO |
| BP | GO:0015858 | nucleoside transport | IEP | Predicted GO |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0016042 | lipid catabolic process | IEP | Predicted GO |
| BP | GO:0016054 | organic acid catabolic process | IEP | Predicted GO |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
| BP | GO:0019395 | fatty acid oxidation | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| BP | GO:0030258 | lipid modification | IEP | Predicted GO |
| BP | GO:0034440 | lipid oxidation | IEP | Predicted GO |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
| CC | GO:0042579 | microbody | IEP | Predicted GO |
| BP | GO:0044242 | cellular lipid catabolic process | IEP | Predicted GO |
| BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Predicted GO |
| MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Predicted GO |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 56 | 117 |
| No external refs found! |