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  5. LOC_Os01g57690

LOC_Os01g57690


Description : early nodulin 20 precursor, putative, expressed


Gene families : OG_42_0000026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g57690
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
Bradi3g38540 No alias uclacyanin 1 0.03 Orthogroups_2024-Update
Glyma.11G004700 No alias Cupredoxin superfamily protein 0.01 Orthogroups_2024-Update
Glyma.13G275800 No alias early nodulin-like protein 1 0.03 Orthogroups_2024-Update
Potri.002G101300 No alias Cupredoxin superfamily protein 0.02 Orthogroups_2024-Update
Sopen04g029710 No alias Plastocyanin-like domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000469 cleavage involved in rRNA processing IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006282 regulation of DNA repair IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0080135 regulation of cellular response to stress IEP Predicted GO
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 37 112
No external refs found!