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  5. LOC_Os01g57870

LOC_Os01g57870


Description : disease resistance protein RPS2, putative, expressed


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g57870
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
At1g15890 No alias Probable disease resistance protein At1g15890... 0.03 Orthogroups_2024-Update
Bradi5g15560 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Brara.E01220.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01184.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g14100 No alias disease resistance protein RPS2, putative, expressed 0.02 Orthogroups_2024-Update
MA_31961g0010 No alias (at5g63020 : 182.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00004155-RA No alias (at1g12220 : 266.0) Resistance gene, mediates resistance... 0.02 Orthogroups_2024-Update
PSME_00009853-RA No alias (at1g12280 : 271.0) LRR and NB-ARC domains-containing... 0.02 Orthogroups_2024-Update
PSME_00011110-RA No alias (at5g43740 : 165.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00016011-RA No alias (at5g05400 : 116.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00037099-RA No alias (at4g26090 : 230.0) Encodes a plasma membrane protein... 0.03 Orthogroups_2024-Update
PSME_00037873-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00045398-RA No alias (at1g12280 : 140.0) LRR and NB-ARC domains-containing... 0.02 Orthogroups_2024-Update
PSME_00056619-RA No alias (at4g27220 : 229.0) NB-ARC domain-containing disease... 0.02 Orthogroups_2024-Update
Potri.018G137900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T024900 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.T027700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T028700 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.T045200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Solyc11g007790 No alias LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 529 588
IPR002182 NB-ARC 153 373
No external refs found!