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  5. LOC_Os01g57890

LOC_Os01g57890


Description : Homeobox domain containing protein, expressed


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g57890
Cluster HCCA clusters: cluster_0053

Target Alias Description ECC score Gene Family Method Actions
A4A49_02283 No alias homeobox-leucine zipper protein meristem l1 0.03 Orthogroups_2024-Update
At1g73360 No alias Homeobox-leucine zipper protein HDG11... 0.02 Orthogroups_2024-Update
Bradi3g34410 No alias homeobox-7 0.03 Orthogroups_2024-Update
Bradi3g57567 No alias homeodomain GLABROUS 11 0.03 Orthogroups_2024-Update
Brara.G02009.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H00913.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H02446.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G240100 No alias protodermal factor 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G106970.2 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G073440.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
MA_38472g0010 No alias (at4g00730 : 709.0) Encodes a homeodomain protein of the... 0.02 Orthogroups_2024-Update
PSME_00042191-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.017G144601 No alias homeodomain GLABROUS 11 0.03 Orthogroups_2024-Update
Pp1s173_90V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s209_10V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.7G203300.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G309800.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g091630 No alias cutin deficient 2 0.03 Orthogroups_2024-Update
Solyc02g080260 No alias Woolly 0.03 Orthogroups_2024-Update
Solyc08g062520 No alias No description available 0.02 Orthogroups_2024-Update
Solyc08g076370 No alias Homeobox-leucine zipper family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc09g060170 No alias LOW QUALITY:Homeobox leucine zipper protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen06g028680 No alias START domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 222 437
IPR001356 Homeobox_dom 68 122
No external refs found!