LOC_Os01g57954

Description : translation initiation factor IF-1, chloroplast, putative, expressed

Gene families : OG_42_0002488 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002488_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os01g57954
Cluster	HCCA clusters: cluster_0015

Target	Alias	Description	ECC score	Gene Family Method	Actions
Potri.018G038900	No alias	Nucleic acid-binding, OB-fold-like protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0003743	translation initiation factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	InterProScan predictions
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006196	RNA-binding_domain_S1_IF1	19	81

External Links

No external refs found!